MPD

MPD provides a centralized repository of standardized phenotypic, genotypic, and gene expression data for laboratory mouse strains to support translational research and discovery of genotype–phenotype relationships.


Key Features:

  • Centralized Data Repository: Houses phenotypic, genotypic, gene expression, and strain-characteristics datasets contributed by researchers.
  • Standard Reference Datasets: Maintains standardized reference datasets for selecting appropriate mouse strains and ensuring comparability across studies.
  • Genotype–Phenotype Exploration: Provides structured datasets to explore genotype–phenotype relationships and identify genetic markers linked to traits.
  • Hypothesis-Testing Tools: Offers tools for hypothesis testing using existing datasets to design and interpret experiments.
  • Drug Studies and Intervention Data: Includes treatment/control datasets for drug studies and other interventions for preclinical analyses.
  • Data Mining and Analysis: Supports data mining and analysis of large phenotypic, genotypic, and gene expression datasets.

Scientific Applications:

  • Strain Selection for Translational Studies: Enables selection of appropriate mouse strains for studies of genetic disorders, drug efficacy, and other biomedical research.
  • Genetic Basis of Traits and Disease: Facilitates discovery of genotype–phenotype relationships to identify genetic contributors to traits and disease.
  • Preclinical Evaluation and Target Identification: Supports preclinical evaluation of interventions and identification of candidate targets for therapeutic development.

Methodology:

Employs standardized reference datasets together with data mining and hypothesis-testing tools to analyze phenotypic, genotypic, gene expression, and treatment/control datasets.

Topics

Details

Tool Type:
web application
Operating Systems:
Linux, Windows, Mac
Added:
3/30/2017
Last Updated:
11/24/2024

Operations

Data Inputs & Outputs

Publications

Maddatu TP, Grubb SC, Bult CJ, Bogue MA. Mouse Phenome Database (MPD). Nucleic Acids Research. 2011;40(D1):D887-D894. doi:10.1093/nar/gkr1061. PMID:22102583. PMCID:PMC3245053.

Documentation