mrgsolve
mrgsolve simulates hierarchical ordinary differential equation (ODE)-based pharmacometric and systems biology models for quantitative pharmacology, enabling population, PBPK, and QSP simulations relevant to drug development.
Key Features:
- Integration of R and C++: Leverages R and C++ to provide an efficient simulation engine for model execution.
- Hierarchical ODE-Based Models: Supports hierarchical ODE models including physiologically-based pharmacokinetic (PBPK) and quantitative systems pharmacology (QSP) frameworks.
- Parallelizable Workflow: Supports parallelized execution within R workflows to accelerate large-scale simulations.
- Model Specification and Intervention Handling: Allows specification of models and introduction of interventions such as dosing events within simulations.
- Postprocessing of Simulated Results: Provides capabilities for processing and analyzing simulated datasets.
Scientific Applications:
- PBPK Modeling: Simulates PBPK models such as voriconazole with validation against adult and pediatric datasets.
- QSP Modeling: Simulates QSP models including mitogen-activated protein kinase (MAPK) signaling in colorectal cancer and population simulations of combination therapies.
Methodology:
Model specification followed by simulation of hierarchical ODEs with integrated R and C++, introduction of dosing interventions, parallelizable execution, and postprocessing of results.
Topics
Details
- License:
- GPL-2.0
- Tool Type:
- command-line tool
- Programming Languages:
- R, C++
- Added:
- 1/9/2020
- Last Updated:
- 12/29/2020
Operations
Publications
Elmokadem A, Riggs MM, Baron KT. <scp>Quantitative Systems Pharmacology</scp>and<scp>Physiologically‐Based Pharmacokinetic</scp>Modeling With mrgsolve: A Hands‐On Tutorial. CPT: Pharmacometrics & Systems Pharmacology. 2019;8(12):883-893. doi:10.1002/psp4.12467. PMID:31652028. PMCID:PMC6930861.