MSSR
MSSR applies a Mean Shift–based super-resolution algorithm to enhance fluorescence microscopy images and extend spatial resolution beyond the diffraction limit, achieving a theoretical resolution limit of 40 nm.
Key Features:
- Mean Shift super-resolution: Employs a Mean Shift–based algorithm to extend spatial resolution beyond the diffraction limit.
- Theoretical resolution: Reaches a theoretical resolution limit of 40 nm under optimized imaging conditions.
- Fluorophore density robustness: Performs effectively across both low and high fluorophore densities without being constrained by optical setup architecture.
- Single-frame and temporal processing: Processes individual images as well as temporal image stacks.
- Denoising: Incorporates advanced denoising capabilities that surpass other super-resolution microscopy (SRM) approaches.
- Multidimensional and live-cell applicability: Applicable to multidimensional imaging and live cell imaging experiments.
Scientific Applications:
- Sub-cellular structure visualization: Enables visualization of finer sub-cellular structures in fluorescence microscopy.
- Cellular biology studies: Supports detailed structural studies in cellular biology requiring enhanced spatial resolution.
- Molecular dynamics and localization: Facilitates molecular dynamics and high-resolution localization analyses.
- Time-resolved/live imaging: Supports analysis of time-series and live-cell experiments through temporal stack processing.
Methodology:
Computational implementation uses a Mean Shift–based super-resolution algorithm with integrated denoising and supports processing of single images and temporal image stacks, achieving a theoretical 40 nm resolution under optimized conditions.
Topics
Details
- License:
- Not licensed
- Cost:
- Free of charge
- Tool Type:
- plugin
- Operating Systems:
- Mac, Linux, Windows
- Programming Languages:
- Python, R
- Added:
- 2/20/2023
- Last Updated:
- 2/20/2023
Operations
Publications
Torres-García E, Pinto-Cámara R, Linares A, Martínez D, Abonza V, Brito-Alarcón E, Calcines-Cruz C, Valdés-Galindo G, Torres D, Jabloñski M, Torres-Martínez HH, Martínez JL, Hernández HO, Ocelotl-Oviedo JP, Garcés Y, Barchi M, D’Antuono R, Bošković A, Dubrovsky JG, Darszon A, Buffone MG, Morales RR, Rendon-Mancha JM, Wood CD, Hernández-García A, Krapf D, Crevenna ÁH, Guerrero A. Extending resolution within a single imaging frame. Nature Communications. 2022;13(1). doi:10.1038/s41467-022-34693-9. PMID:36460648. PMCID:PMC9718789.