MTBC Gene Atlas

Continuously updated functional re-annotation of the Mycobacterium tuberculosis complex gene set, anchored on the MTBC0 ancestral genome rather than on a single strain. Serves one record per gene combining Pfam domains, ESMFold structures with Foldseek search, protein language-model features, orthology, curated knowledge, protein association networks and intra-species selection inferred from 145209 sequenced genomes, with dated sources and a graded confidence level for every field. Intended as a successor to Mycobrowser, which is no longer maintained.

Topics

Collections

Details

License:
CC-BY-4.0
Maturity:
Mature
Cost:
Free of charge
Tool Type:
api, web application
Operating Systems:
Linux, Mac, Windows
Programming Languages:
Python
Added:
8/12/2026
Last Updated:
8/12/2026

Operations

Data Inputs & Outputs

Other operations do not define inputs or outputs.

Publications

Documentation

General
https://mtbc.gclab.fr/about
Scope, evidence layers, citation and coordinate-system conventions.

Downloads

Links

Repository
https://github.com/cguyeux/mtbc-gene-atlas
(Source code repository, one script per evidence layer (MIT license).)