muts-needle-plot
muts-needle-plot visualizes mutation data using the needle-plot (stem-plot/lollipop-plot) format to represent individual variants as dots with vertical stems for positional and frequency inspection.
Key Features:
- Data Visualization: Uses the needle-plot (stem-plot/lollipop-plot) format to display mutation data as dots with vertical stems.
- Stacked Display: Supports stacking multiple datasets to enable comparative analysis across samples or conditions.
- Optimized Styling: Renders output in SVG with standardized styling and manages interactivity via external CSS.
Scientific Applications:
- Mutation Frequency Comparison: Compare mutation frequencies across different samples or experimental conditions.
- Variant Identification: Identify individual mutations and outliers for further investigation.
- Data Presentation: Present complex mutation datasets in a concise, interpretable visual format.
Methodology:
Renders mutation data as needle-plots (dots with vertical stems) in SVG, supports stacking of multiple datasets, and standardizes styling within SVG while delegating interactivity to external CSS.
Topics
Details
- Tool Type:
- library
- Operating Systems:
- Linux, Windows, Mac
- Programming Languages:
- JavaScript
- Added:
- 1/22/2015
- Last Updated:
- 12/10/2018
Operations
Data Inputs & Outputs
Visualisation
Publications
Schroeder MP, Lopez-Bigas N. muts-needle-plot: Mutations Needle Plot v0.8.0 [Internet]. Zenodo; 2015. Available from: https://zenodo.org/record/14561
DOI: 10.5281/zenodo.14561