MVPA-Light
MVPA-Light implements multivariate pattern analysis methods for classification and regression of neuroimaging data to investigate brain function using MEG and fMRI.
Key Features:
- Multidimensional Data Analysis: Provides functions for handling multi-dimensional datasets, including generalization (time x time) and searchlight analyses for neuroimaging data.
- Cross-validation and Hyperparameter Tuning: Includes cross-validation and hyperparameter tuning routines for model evaluation and selection.
- Nested Preprocessing: Supports nested preprocessing integrated into the modeling pipeline.
- Statistical Significance Testing: Computes classification and regression metrics and assesses their statistical significance.
- Modularity and Extensibility: Offers a modular architecture that enables addition of new methods or custom analyses.
- Integration Capabilities: Interfaces with LIBSVM and LIBLINEAR and integrates with the FieldTrip neuroimaging toolbox.
Scientific Applications:
- Magnetoencephalography (MEG): Enables classification and regression analyses on MEG datasets.
- Functional Magnetic Resonance Imaging (fMRI): Supports multivariate and searchlight analyses on fMRI datasets.
- Cognitive Neuroscience and Neuroimaging Studies: Facilitates investigations of brain function and structure using classification and regression approaches.
Methodology:
Implements native classifiers and regression models with modern optimization algorithms; provides cross-validation, hyperparameter tuning, nested preprocessing, computation of classification and regression metrics with statistical significance assessment, generalization (time x time) and searchlight analyses; interfaces with LIBSVM and LIBLINEAR and integrates with FieldTrip.
Topics
Details
- License:
- MIT
- Tool Type:
- command-line tool
- Programming Languages:
- MATLAB
- Added:
- 1/18/2021
- Last Updated:
- 3/8/2021
Operations
Publications
Treder MS. MVPA-Light: A Classification and Regression Toolbox for Multi-Dimensional Data. Frontiers in Neuroscience. 2020;14. doi:10.3389/fnins.2020.00289. PMID:32581662. PMCID:PMC7287158.