myGenomeBrowser

myGenomeBrowser provides a genome browser platform based on JBrowse for building, querying, and sharing genome visualizations to support genomic data exploration and analysis.


Key Features:

  • User Autonomy: Enables users to manage, query, and analyze genomic datasets and genome browsers.
  • Data Sharing Capabilities: Facilitates sharing of genome visualizations and datasets among researchers.
  • Technical Implementation: Built on JBrowse and implemented using Perl, JavaScript, Apache, and Docker.

Scientific Applications:

  • Genomic Data Analysis: Visualization and querying of genomic sequences and annotation tracks to support analysis of gene function and regulation.
  • Collaborative Research: Sharing and comparison of genome annotations and tracks across researchers and institutions.

Methodology:

Built on the JBrowse framework and implemented using Perl, JavaScript, Apache, and Docker.

Topics

Details

License:
CECILL-B
Maturity:
Mature
Cost:
Free of charge
Tool Type:
web application
Operating Systems:
Linux, Windows, Mac
Programming Languages:
Perl
Added:
1/9/2018
Last Updated:
1/13/2019

Operations

Publications

Carrere S, Gouzy J. myGenomeBrowser: building and sharing your own genome browser. Bioinformatics. 2017;33(8):1255-1257. doi:10.1093/bioinformatics/btw800. PMID:28011789. PMCID:PMC5408841.

Documentation

Downloads