naturaList
naturaList classifies species occurrence records by identification confidence to improve data quality for biodiversity research and is provided as an R package (version 0.2.0).
Key Features:
- Confidence Classification: Classifies species occurrences into six distinct levels of confidence regarding identification accuracy.
- Specialist Identification Recognition: Assigns the highest confidence level to records identified by a recognized specialist, requiring the specialist's name for designation.
- Data Filtering and Grid Cell Analysis: Filters occurrence data within specified grid cells and retains only the highest-confidence record per cell.
- Reproducibility Assurance: Standardizes occurrence data processing and cleaning to support reproducible biodiversity analyses.
Scientific Applications:
- Macroecology and Biogeography: Improves the reliability of species distribution datasets used in macroecological and biogeographical analyses.
- Taxonomy and Data Curation: Supports taxonomists and data curators in identifying records and sites that require further taxonomic evaluation.
Methodology:
Case study using 323 geographically-coordinated occurrences of Alsophila setosa from the Atlantic Forest, classifying records and retaining only those in the two highest confidence levels to yield 94 high-confidence occurrences.
Topics
Details
- Tool Type:
- library
- Programming Languages:
- R
- Added:
- 1/18/2021
- Last Updated:
- 3/8/2021
Operations
Publications
Rodrigues AV, Nakamura G, Duarte L. <i>naturaList</i>: a package to classify occurrence records in levels of confidence in species identification. Unknown Journal. 2020. doi:10.1101/2020.05.26.115220.