NBRP resources
NBRP resources provide centralized access to curated bioresource records and distribution metadata to support life science research.
Key Features:
- Organizational network: Comprised of 27 core resource facilities and an information center managing centralized data aggregation and distribution.
- BioResource World (BRW): An integrated database system that aggregates 30 distinct facility-specific databases.
- Database scale: Contains over 4.5 million records covering wild species, inbred lines, mutants, genetically engineered organisms, and DNA clones.
- Cross-database search: Enables searching across the 30 integrated databases from BRW.
- Search modalities: Supports summary browsing, keyword searching, and advanced queries using DNA sequences or Gene Ontology terms.
- Distribution requests: Links search results to online forms for requesting the distribution of research materials.
- Circulation system: Accepts submission of publication details resulting from research using NBRP resources.
Scientific Applications:
- Resource discovery: Locating biological materials such as wild species, inbred lines, mutants, genetically engineered organisms, and DNA clones for experimental use.
- Functional genetics: Identifying and obtaining mutants and genetically engineered organisms for gene function studies.
- Molecular biology and cloning: Retrieving DNA clones for cloning, sequencing, and molecular analyses.
- Comparative studies: Accessing inbred lines and wild species datasets for comparative and evolutionary analyses.
- Gene-centric queries: Using DNA sequence and Gene Ontology-based searches to find resources linked to specific genes or functions.
- Research tracking: Recording and aggregating publications associated with distributed NBRP resources via the circulation system.
Methodology:
BioResource World (BRW) aggregates 30 facility-specific databases and implements cross-database searches with summary browsing, keyword search, and advanced queries by DNA sequence or Gene Ontology terms; search results link to online distribution request forms and a circulation system collects publication metadata.
Topics
Details
- Tool Type:
- web application
- Operating Systems:
- Linux, Windows, Mac
- Added:
- 3/27/2017
- Last Updated:
- 12/10/2018
Operations
Publications
Yamazaki Y, et al. NBRP databases: databases of biological resources in Japan. Nucleic Acids Res. 2010; 38:D26-32. doi: 10.1093/nar/gkp996
PMID: 19934255