nCov2019

nCov2019 provides aggregated COVID-19 case data and vaccine and therapeutic development information for epidemiological analysis and visualization in R.


Key Features:

  • Data Aggregation: Collects stable COVID-19 case data from multiple authoritative sources, providing recent and historical records at country and province levels.
  • Medical Progress Information: Reports global vaccine and therapeutic candidate data, including counts of 51 vaccines and 54 drugs under development as of January 14, 2021, and indicates pre-clinical status where available.
  • R Language Interfaces: Exposes R functions for data retrieval, subsetting, and programmatic data operations.
  • Visualization Methods: Supplies visualization routines to generate graphical representations of pandemic metrics and temporal patterns such as multiple peaks across regions.

Scientific Applications:

  • Trend Analysis: Analyze temporal trends and regional case trajectories across countries and provinces.
  • Epidemiological Surveillance: Monitor case counts and geographic spread for public-health analyses.
  • Policy Support: Inform policy and intervention assessment through aggregated case and temporal data.
  • Vaccine and Therapeutic Tracking: Track development status and counts of vaccine candidates and therapeutic drugs.
  • Interdisciplinary Research: Provide dataset access for cross-disciplinary modeling and public-health research.

Methodology:

Systematic collection and aggregation of COVID-19 case data from multiple authoritative sources to country/province granularity; integration of these datasets with R functions for data retrieval and with visualization routines for graphical output.

Topics

Collections

Details

License:
Other
Cost:
Free of charge
Tool Type:
command-line tool
Operating Systems:
Mac, Linux, Windows
Programming Languages:
R
Added:
11/5/2021
Last Updated:
11/6/2021

Operations

Publications

Wu T, Hu E, Ge X, Yu G. nCov2019: an R package for studying the COVID-19 coronavirus pandemic. PeerJ. 2021;9:e11421. doi:10.7717/peerj.11421. PMID:34178436. PMCID:PMC8199916.

PMID: 34178436
PMCID: PMC8199916
Funding: - Startup fund from Southern Medical University: G618289088

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