NDDRF
NDDRF provides a knowledgebase of risk factors for neurodegenerative diseases to support personalized prevention, diagnosis, and prediction.
Key Features:
- Literature mining: Extracted records from PubMed covering publications from 1975 to 2020, yielding 1,071 articles and 2,293 records.
- Repository contents: Compiles 998 single or combined risk factors associated with the 14 most prevalent neurodegenerative diseases.
- Risk factor classification: Systematically categorizes risk factors into epidemiological (469), genetic (324), and biochemical (153) groups.
- Directional annotation: Distinguishes positive/protective factors (179) from factors with a negative influence on NDDs (880).
- Explainable AI support: Provides structured, curated risk-factor data to support explainable artificial intelligence modeling for diagnostic and preventive strategies.
Scientific Applications:
- Personalized prevention and diagnosis: Supports individualized risk assessment and prediction for neurodegenerative diseases using curated risk-factor associations.
- Research on disease genesis and progression: Facilitates systematic investigations into the origins and progression of pan-neurodegenerative diseases by aggregating epidemiological, genetic, and biochemical factors.
- Explainable model development: Enables development and validation of explainable artificial intelligence models for diagnostics and prevention using curated datasets.
Methodology:
Extensive literature mining of PubMed (1975–2020) to extract 1,071 articles and 2,293 records, compilation of a repository containing 998 risk factors, and systematic categorization of those factors into epidemiological (469), genetic (324), and biochemical (153) groups with annotation of positive/protective (179) versus negative (880) influences.
Topics
Details
- License:
- Other
- Tool Type:
- web application
- Operating Systems:
- Mac, Linux, Windows
- Added:
- 11/15/2022
- Last Updated:
- 11/24/2024
Operations
Data Inputs & Outputs
Data retrieval
Outputs
Publications
Bi C, Zhou S, Liu X, Zhu Y, Yu J, Zhang X, Shi M, Wu R, He H, Zhan C, Lin Y, Shen B. NDDRF: A risk factor knowledgebase for personalized prevention of neurodegenerative diseases. Journal of Advanced Research. 2022;40:223-231. doi:10.1016/j.jare.2021.06.015. PMID:36100329. PMCID:PMC9481935.