NDDRF

NDDRF provides a knowledgebase of risk factors for neurodegenerative diseases to support personalized prevention, diagnosis, and prediction.


Key Features:

  • Literature mining: Extracted records from PubMed covering publications from 1975 to 2020, yielding 1,071 articles and 2,293 records.
  • Repository contents: Compiles 998 single or combined risk factors associated with the 14 most prevalent neurodegenerative diseases.
  • Risk factor classification: Systematically categorizes risk factors into epidemiological (469), genetic (324), and biochemical (153) groups.
  • Directional annotation: Distinguishes positive/protective factors (179) from factors with a negative influence on NDDs (880).
  • Explainable AI support: Provides structured, curated risk-factor data to support explainable artificial intelligence modeling for diagnostic and preventive strategies.

Scientific Applications:

  • Personalized prevention and diagnosis: Supports individualized risk assessment and prediction for neurodegenerative diseases using curated risk-factor associations.
  • Research on disease genesis and progression: Facilitates systematic investigations into the origins and progression of pan-neurodegenerative diseases by aggregating epidemiological, genetic, and biochemical factors.
  • Explainable model development: Enables development and validation of explainable artificial intelligence models for diagnostics and prevention using curated datasets.

Methodology:

Extensive literature mining of PubMed (1975–2020) to extract 1,071 articles and 2,293 records, compilation of a repository containing 998 risk factors, and systematic categorization of those factors into epidemiological (469), genetic (324), and biochemical (153) groups with annotation of positive/protective (179) versus negative (880) influences.

Topics

Details

License:
Other
Tool Type:
web application
Operating Systems:
Mac, Linux, Windows
Added:
11/15/2022
Last Updated:
11/24/2024

Operations

Data Inputs & Outputs

Data retrieval

Publications

Bi C, Zhou S, Liu X, Zhu Y, Yu J, Zhang X, Shi M, Wu R, He H, Zhan C, Lin Y, Shen B. NDDRF: A risk factor knowledgebase for personalized prevention of neurodegenerative diseases. Journal of Advanced Research. 2022;40:223-231. doi:10.1016/j.jare.2021.06.015. PMID:36100329. PMCID:PMC9481935.

PMID: 36100329
PMCID: PMC9481935
Funding: - National Key Research and Development Program of China: 2016YFC1306605 - National Natural Science Foundation of China: 32070671