NeMo-TMS

NeMo-TMS enables multi-scale computational modeling of transcranial magnetic stimulation (TMS) effects on single neurons and subcellular activity.


Key Features:

  • Multi-Scale Modeling Framework: Estimates induced electric fields in whole-brain volume conductor models and links macroscopic fields to microscopic neuronal effects.
  • Accurate Neuron Models: Generates neuron models from morphological reconstructions and couples them to external TMS-induced electric fields for cellular and subcellular simulations.
  • Simulation Capabilities: Simulates single-pulse and repetitive Transcranial Magnetic Stimulation (rTMS) protocols to probe neuronal responses under varied stimulation parameters.
  • Visualization Tools: Produces 3D visualization of spatial and temporal dynamics of TMS-induced neural activity.

Scientific Applications:

  • Mechanistic Studies of TMS: Dissects cellular and subcellular mechanisms by which TMS alters neuronal activity.
  • Plasticity and Therapeutic Protocol Development: Supports modeling of TMS plasticity-inducing protocols to study neuroplasticity and inform therapeutic interventions for neurological disorders.
  • Neural Circuit Modulation: Links field distributions to single-neuron responses to assess how TMS-induced electric fields modulate neural circuits.

Methodology:

Coupling neuron models generated from morphological reconstructions with induced electric fields computed in whole-brain volume conductor models to simulate interactions between TMS-induced fields and neuronal structures and analyze cellular and subcellular responses.

Topics

Details

License:
GPL-3.0
Tool Type:
library
Programming Languages:
C, MATLAB, Lua
Added:
1/18/2021
Last Updated:
3/8/2021

Operations

Publications

Shirinpour S, Hananeia N, Rosado J, Galanis C, Vlachos A, Jedlicka P, Queisser G, Opitz A. Multi-scale Modeling Toolbox for Single Neuron and Subcellular Activity under (repetitive) Transcranial Magnetic Stimulation. Unknown Journal. 2020. doi:10.1101/2020.09.23.310219.