NexusLIMS
NexusLIMS manages and consolidates experimental data and metadata for multi-user electron microscopy facilities to standardize metadata capture and support reproducible research.
Key Features:
- Network Infrastructure: A networked architecture supports integration and communication across facility information technology resources.
- Custom Software Package: A software component harvests and extracts experimental data from instrument and institutional sources to construct comprehensive experimental records.
- Metadata Conformance: Generated metadata conforms to the Nexus Experiment schema for standardized documentation of experiments.
Scientific Applications:
- Shared electron microscopy facilities: Centralizing and organizing data produced in multi-user electron microscopy environments to support collaborative experiments.
- Metadata standardization and reproducibility: Applying the Nexus Experiment schema to improve reproducibility and transparency of electron microscopy experiments.
- Experimental record aggregation: Compiling metadata and experimental data from diverse sources to create comprehensive records for each experiment.
Methodology:
A custom software package harvests and extracts experimental data from diverse sources and constructs comprehensive metadata records that conform to the Nexus Experiment schema.
Topics
Details
- Cost:
- Commercial
- Tool Type:
- web application
- Added:
- 10/25/2021
- Last Updated:
- 10/25/2021
Operations
Publications
Taillon JA, Bina TF, Plante RL, Newrock MW, Greene GR, Lau JW. NexusLIMS: A Laboratory Information Management System for Shared-Use Electron Microscopy Facilities. Microscopy and Microanalysis. 2021;27(3):511-527. doi:10.1017/s1431927621000222. PMID:33908340. PMCID:PMC8551308.
PMID: 33908340