NiftyFit

NiftyFit performs unified model-fitting for multi-contrast magnetic resonance imaging to integrate Arterial Spin Labeled MRI, T1 relaxometry, T2 relaxometry, and Diffusion Weighted Imaging and improve parameter estimation across modalities.


Key Features:

  • Unified Model-Fitting Framework: Provides a cohesive environment for integrating data from multiple MR modalities to enable joint estimation across contrasts.
  • Support for Multiple Modalities: Accommodates Arterial Spin Labeled MRI, T1 relaxometry, T2 relaxometry, and Diffusion Weighted Imaging.
  • Enhanced Parameter Estimation: Applies joint model fitting to improve parameter estimation accuracy in individual models.
  • Cross-Modal Parameter Generation: Facilitates generation of derived parameters that link different MR modalities.

Scientific Applications:

  • Neuroimaging Research: Enables exploration of relationships between different MR parameters to study brain function, structure, development, and disease.
  • Brain Tissue Characterization: Supports investigation of complex interactions within brain tissues by integrating multi-contrast information.

Methodology:

Performs joint model fitting within a unified model-fitting framework to optimize parameter estimation across multiple MRI contrasts and derive cross-modal parameters.

Topics

Details

License:
BSD-3-Clause
Tool Type:
command-line tool
Operating Systems:
Linux, Windows, Mac
Programming Languages:
C++, C
Added:
8/28/2018
Last Updated:
1/13/2019

Operations

Publications

Melbourne A, Toussaint N, Owen D, Simpson I, Anthopoulos T, De Vita E, Atkinson D, Ourselin S. NiftyFit: a Software Package for Multi-parametric Model-Fitting of 4D Magnetic Resonance Imaging Data. Neuroinformatics. 2016;14(3):319-337. doi:10.1007/s12021-016-9297-6. PMID:26972806. PMCID:PMC4896995.

PMID: 26972806
PMCID: PMC4896995
Funding: - Engineering and Physical Sciences Research Council (GB): EP/H046410/1

Documentation

Links