NIMAA

NIMAA performs nominal data mining in R by integrating graph theory and data mining to analyze datasets composed of nominal variables.


Key Features:

  • Graph Construction: Creates weighted and unweighted bipartite graphs from nominal variables.
  • Label Analysis and Clustering: Computes label similarities and clusters labels into super-labels.
  • Validation and Prediction: Validates clustering results and predicts bipartite edges by imputing missing edge weights.
  • Visualization Tools: Provides visualization functions for interpreting graph-based structures and clustering outcomes.

Scientific Applications:

  • Nominal data exploration in biology: Enables identification of patterns and relationships among categorical variables in complex biological datasets.

Methodology:

Integration of graph-theoretic and data-mining methods to construct weighted and unweighted bipartite graphs from nominal variables; computation of label similarity and clustering into super-labels; validation of clustering and imputation of missing edge weights to predict bipartite edges; generation of visualizations for results.

Topics

Details

License:
GPL-3.0
Cost:
Free of charge
Tool Type:
library
Operating Systems:
Mac, Linux, Windows
Programming Languages:
R
Added:
9/17/2022
Last Updated:
11/24/2024

Operations

Data Inputs & Outputs

Clustering

Outputs

    Publications

    Jafari M, Chen C, Mirzaie M, Tang J. NIMAA: an R/CRAN package to accomplish NomInal data Mining AnAlysis. Unknown Journal. 2022. doi:10.1101/2022.01.13.475835.

    Documentation

    Links