NMRProcFlow

NMRProcFlow processes and visualizes one-dimensional (1D) nuclear magnetic resonance (NMR) spectra to support metabolomics analyses of ^1H and ^13C NMR data.


Key Features:

  • 1D ^1H and ^13C NMR support: Handles one-dimensional ^1H and ^13C NMR spectra for metabolomics analyses.
  • Baseline correction: Performs comprehensive baseline correction on 1D NMR spectra.
  • Chemical shift calibration: Provides precise chemical shift calibration.
  • Spectral alignment: Performs alignment of spectra to correct chemical shift variations.
  • Peak disentanglement: Disentangles intertwined peaks in metabolomics spectra.
  • Spectral visualization with experimental factors: Visualizes NMR spectra alongside experimental-factor levels to link experimental design with analyses.
  • Raw-to-interpretable processing: Processes spectra from raw data to interpretable results.

Scientific Applications:

  • Metabolic fingerprinting: Enables metabolic fingerprinting through processed 1D NMR spectral profiles.
  • Targeted metabolomics: Supports targeted metabolomics studies by facilitating analysis of metabolite-related signals in 1D NMR spectra.
  • Integration with experimental design: Connects experimental-factor levels with spectral visualization to facilitate statistical analyses.

Methodology:

Computational steps explicitly include baseline correction, chemical shift calibration, spectral alignment, disentanglement of intertwined peaks, visualization of spectra alongside experimental-factor levels, and processing from raw data to interpretable results.

Topics

Details

License:
GPL-3.0
Maturity:
Mature
Cost:
Free of charge
Tool Type:
desktop application, web application
Operating Systems:
Linux, Windows, Mac
Programming Languages:
R, PHP, JavaScript
Added:
4/13/2017
Last Updated:
11/24/2024

Operations

Publications

Jacob D, Deborde C, Lefebvre M, Maucourt M, Moing A. NMRProcFlow: a graphical and interactive tool dedicated to 1D spectra processing for NMR-based metabolomics. Metabolomics. 2017;13(4). doi:10.1007/s11306-017-1178-y. PMID:28261014. PMCID:PMC5313591.

PMID: 28261014
PMCID: PMC5313591
Funding: - Agence Nationale de la Recherche: ANR-11-INBS-0010

Documentation

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