NMRtist
NMRtist automates analysis of protein NMR spectra to perform peak picking, chemical shift assignment, and derivation of protein three-dimensional structures from NMR data.
Key Features:
- Automated Peak Picking: Uses algorithmic analysis to identify peaks in NMR spectra for subsequent interpretation.
- Chemical Shift Assignment: Employs deep learning models to assign chemical shifts from NMR spectral data.
- Protein Structure Determination: Derives protein three-dimensional configurations from NMR data.
- Virtual Storage for Spectra Deposition: Provides deposition and storage of NMR spectra for archival and downstream analysis.
Scientific Applications:
- Structural Biology: Accelerates interpretation of protein NMR experiments and supports protein structure determination workflows.
- High-throughput NMR Analysis: Enables processing of large numbers of protein NMR spectra to support high-throughput studies.
- Data Archiving and Reuse: Facilitates deposition and reuse of NMR spectra within bioinformatics and computational studies.
Methodology:
Leverages deep learning algorithms trained on extensive datasets to perform peak picking and chemical shift assignment with high accuracy; models are optimized on large-scale computational resources and integrate cloud computing to handle large volumes of NMR data.
Topics
Details
- Cost:
- Free of charge
- Tool Type:
- web application
- Operating Systems:
- Mac, Linux, Windows
- Added:
- 3/18/2023
- Last Updated:
- 3/18/2023
Operations
Publications
Klukowski P, Riek R, Güntert P. NMRtist: an online platform for automated biomolecular NMR spectra analysis. Bioinformatics. 2023;39(2). doi:10.1093/bioinformatics/btad066. PMID:36723167. PMCID:PMC9913044.