Nomenclature WS
Nomenclature WS classifies and compares Mycobacterium tuberculosis genotyping data against a reference database representing major lineages to characterize genetic diversity and evolutionary relationships.
Key Features:
- Genotyping Analysis: Provides analysis of genotyping data to identify strain-specific characteristics and genetic variation within Mycobacterium tuberculosis isolates.
- Reference Database Comparison: Compares submitted strain data against an internal reference database that represents major Mycobacterium tuberculosis lineages for lineage identification and comparative studies.
- SOAP-based Interoperability: Uses SOAP (Simple Object Access Protocol) for web-service communication and adheres to SOAP message structure to enable platform-independent data exchange.
Scientific Applications:
- Epidemiological investigations: Supports analysis of strain genotypes to inform transmission pattern and outbreak source investigations.
- Drug resistance surveillance: Facilitates detection and comparison of strain features relevant to resistance mechanisms.
- Lineage and evolutionary studies: Enables characterization of major Mycobacterium tuberculosis lineages and assessment of genetic diversity and evolutionary relationships.
- Public health surveillance: Supports rapid identification and characterization of strains to aid disease control and prevention efforts.
Methodology:
Uses SOAP (Simple Object Access Protocol) for web-service communication adhering to SOAP message structure and compares submitted genotyping data against an internal reference database representing major M. tuberculosis lineages.
Topics
Details
- Tool Type:
- api
- Operating Systems:
- Linux, Windows, Mac
- Programming Languages:
- Java, C++, Perl
- Added:
- 8/3/2015
- Last Updated:
- 12/10/2018
Operations
Publications
Melzer I. SOAP. Service-orientierte Architekturen mit Web Services. 2010. doi:10.1007/978-3-8274-2550-8_5.
Documentation
Links
Software catalogue
https://www.biocatalogue.org/services/3744