NUTMEG

NUTMEG implements MATLAB-based source-space reconstruction and statistical analysis of magnetoencephalography (M/EEG) data to assess spatiotemporal neural dynamics.


Key Features:

  • Data Import and Preprocessing: Multiple options for importing magnetoencephalography (M/EEG) data and performing preprocessing steps for downstream analysis.
  • Sensor-to-Source-Statistics Pipeline: End-to-end processing from sensor-level data through source reconstruction to statistical testing.
  • Source Reconstruction: A wide array of source reconstruction algorithms are provided, including interference cancellation techniques to mitigate external noise.
  • Functional Connectivity Analysis: Built-in tools compute functional connectivity metrics to characterize neural network interactions and dynamics.
  • Five-Dimensional Data Visualization: Visualization of data across three spatial and two temporal dimensions to examine spatiotemporal neural activity.
  • Interoperability and Scripting: Each operation is implemented as a standalone MATLAB script to enable interoperability with other software toolboxes and scripted workflows.

Scientific Applications:

  • Source-space mapping of neural activations: Localizing and characterizing spatiotemporal patterns of brain activity from M/EEG recordings.
  • Functional connectivity and network dynamics: Investigating interactions and dynamics among brain regions using computed connectivity metrics.
  • Group-level inferential statistics: Performing statistical comparisons and group analyses across subjects or conditions.
  • Integration with structural MRI: Combining source-space results with structural MRI for anatomical localization of reconstructed sources.

Methodology:

Computational steps explicitly include M/EEG data import and preprocessing, source reconstruction using multiple algorithms with interference cancellation options, functional connectivity computation, inferential statistical testing for group analyses, and five-dimensional (three spatial + two temporal) visualization, with each operation implemented as a standalone MATLAB script.

Topics

Details

Tool Type:
library
Programming Languages:
MATLAB
Added:
1/18/2021
Last Updated:
3/18/2021

Operations

Publications

Hinkley LBN, Dale CL, Cai C, Zumer J, Dalal S, Findlay A, Sekihara K, Nagarajan SS. NUTMEG: Open Source Software for M/EEG Source Reconstruction. Frontiers in Neuroscience. 2020;14. doi:10.3389/fnins.2020.00710. PMID:32982658. PMCID:PMC7478146.