ODORactor
ODORactor predicts odorant receptors (ORs) activated by small molecules from their molecular structures and supports browsing of curated OR–ligand pairs.
Key Features:
- Structure-based OR prediction: Predicts ORs from arbitrary chemical structures, indicating candidate receptor activation by specific odorants.
- Odorant verification: Performs odorant verification to evaluate chemical structures for odorant properties.
- OR recognition: Maps odorants to candidate ORs through OR recognition based on molecular structure.
- Curated OR–ligand database: Provides a comprehensive repertoire of OR–ligand interactions curated from the literature for browsing and reference.
- Experimental validation: Incorporates experimentally validated OR responses for various odorants to support and corroborate predictions.
Scientific Applications:
- Olfactory coding studies: Deciphering complex olfactory coding mechanisms by linking odorants to their candidate ORs.
- Basic olfactory research: Investigating the molecular basis of smell and receptor–ligand specificity.
- Odorant discovery: Supporting discovery and characterization of novel odorants through predicted OR interactions.
- Fragrance and flavor development: Guiding design and selection of fragrance or flavor compounds via predicted OR–ligand relationships.
Methodology:
Performs odorant verification and OR recognition to predict OR activation from molecular structures and supplies a literature-curated OR–ligand database.
Topics
Collections
Details
- Tool Type:
- web application
- Added:
- 8/1/2023
- Last Updated:
- 11/24/2024
Operations
Publications
Liu X, Su X, Wang F, Huang Z, Wang Q, Li Z, Zhang R, Wu L, Pan Y, Chen Y, Zhuang H, Chen G, Shi T, Zhang J. ODORactor: a web server for deciphering olfactory coding. Bioinformatics. 2011;27(16):2302-2303. doi:10.1093/bioinformatics/btr385. PMID:21700676.
PMID: 21700676