OdoriFy
OdoriFy predicts interactions between human olfactory receptors (ORs) and odorant molecules using deep neural network-based prediction models combined with explainable artificial intelligence (AI) to characterize agonists, nonagonists, and receptor–ligand pairs.
Key Features:
- Odor Finder: Identifies odorant molecules that interact with wildtype or mutant human olfactory receptors (ORs).
- Odorant Predictor: Classifies input chemicals as odorants or nonodorants using deep neural network-based prediction models.
- OR Finder: Identifies responsive ORs to a given query odorant to map potential receptor–ligand interactions.
- Odorant-OR Pair Analysis: Validates interactions between specific odorants and ORs and provides explainable AI-derived rationales at atomic resolution for odorants and amino-acid-level resolution for ORs.
Scientific Applications:
- Mechanistic studies of olfaction: Characterizes molecular underpinnings of smell perception by identifying OR agonists and nonagonists.
- Receptor–ligand mapping: Maps responsive ORs to odorants to explore the functional relevance of ORs in sensory biology.
- Chemical prioritization for validation: Screens and prioritizes candidate odorants and odorant–OR pairs for experimental follow-up.
Methodology:
Deep neural network-based prediction models trained on a manually curated dataset of human ORs with known agonists and nonagonists, coupled with explainable AI that provides atomic-resolution rationales for odorant/nonodorant predictions and amino-acid-level rationales for OR predictions.
Topics
Details
- Cost:
- Free of charge
- Tool Type:
- web application
- Operating Systems:
- Mac, Linux, Windows
- Programming Languages:
- Python, Shell
- Added:
- 11/29/2021
- Last Updated:
- 11/29/2021
Operations
Publications
Gupta R, Mittal A, Agrawal V, Gupta S, Gupta K, Jain RR, Garg P, Mohanty SK, Sogani R, Chhabra HS, Gautam V, Mishra T, Sengupta D, Ahuja G. OdoriFy: A conglomerate of artificial intelligence–driven prediction engines for olfactory decoding. Journal of Biological Chemistry. 2021;297(2):100956. doi:10.1016/j.jbc.2021.100956. PMID:34265305. PMCID:PMC8342790.