OGT-PIN
OGT-PIN catalogs experimentally identified protein interactors of O-linked N-acetylglucosamine transferase (OGT) and its orthologues across multiple species to support analysis of OGT-centered molecular networks.
Key Features:
- Extensive Curation: Datasets were rigorously curated from public repositories and specialized publications focused on O-GlcNAc modifications to ensure high-confidence interactions.
- Broad Species Coverage: Includes interactome data from Homo sapiens, Mus musculus, Rattus norvegicus, Drosophila melanogaster, and Arabidopsis thaliana.
- High-Stringency Interactors: Identifies up to 929 high-stringency OGT interactors, including 784 proteins annotated as human OGT interactors.
- Functional Diversity: Encompasses proteins involved in DNA repair, RNA metabolism, translational regulation, and cell cycle control, with enrichment in regulators of transcription and (co)translation.
- Hub Protein Insight: The compiled dataset indicates that OGT functions as a hub protein within cellular molecular networks.
Scientific Applications:
- Cell Biology: Facilitates analysis of OGT-mediated protein interactions underlying cellular processes such as transcription, translation, and cell cycle control.
- Molecular Genetics: Supports investigation of genetic and molecular regulation associated with OGT and O-GlcNAcylation.
- Disease Research: Enables exploration of associations between OGT interaction networks and diseases, particularly those involving dysregulation of transcription and translation.
Methodology:
Datasets were curated from public repositories and specialized publications on O-GlcNAc modifications and filtered using high-stringency criteria to identify OGT interactors.
Topics
Details
- Cost:
- Free of charge
- Tool Type:
- web application
- Operating Systems:
- Mac, Linux, Windows
- Added:
- 2/12/2022
- Last Updated:
- 2/12/2022
Operations
Publications
Ma J, Hou C, Li Y, Chen S, Wu C. OGT Protein Interaction Network (OGT-PIN): A Curated Database of Experimentally Identified Interaction Proteins of OGT. International Journal of Molecular Sciences. 2021;22(17):9620. doi:10.3390/ijms22179620. PMID:34502531. PMCID:PMC8431785.
DOI: 10.3390/IJMS22179620
PMID: 34502531
PMCID: PMC8431785
Funding: - Office of Extramural Research, National Institutes of Health: P30 CA051008