OmicNavigator

OmicNavigator organizes and visualizes results from high-throughput omic experiments to support exploration and archival of study-specific analytical outputs.


Key Features:

  • Archival Capabilities: Archives results of omic analyses and supports integration of diverse study-specific methodologies.
  • Visualization Tools: Generates custom visualizations, including interactive graphics and tables, tailored to dataset-specific analytical needs.
  • Interactive Exploration: Provides analytical tools, graphics, and tables that enable interactive exploration of study results.

Scientific Applications:

  • Multi-omic studies: Supports analysis and visualization of genomics, proteomics, metabolomics, and transcriptomics datasets by accommodating different analytical approaches.

Methodology:

Developed as an R package, OmicNavigator leverages the statistical computing capabilities of R to process and visualize omic data and allows integration of custom scripts and analytical tools.

Topics

Details

License:
LAL-1.2
Cost:
Free of charge
Tool Type:
library
Programming Languages:
R
Added:
6/19/2024
Last Updated:
11/24/2024

Operations

Publications

Ernst TR, Blischak JD, Nordlund P, Dalen J, Moore J, Bhamidipati A, Dwivedi P, LoGrasso J, Curado MR, Engelmann BW. OmicNavigator: open-source software for the exploration, visualization, and archival of omic studies. BMC Bioinformatics. 2024;25(1). doi:10.1186/s12859-024-05743-4. PMID:38658834. PMCID:PMC11040775.