openCARP
openCARP simulates cardiac electrophysiology from single-cell ion channel dynamics to organ-level conduction to enable in-silico experiments in computational cardiology.
Key Features:
- Multi-Scale Simulation Capabilities: Supports simulations from single-cell ion channel dynamics to organ-level cardiac conduction.
- CARPutils Python Framework: Integrates the CARPutils Python framework to develop and automate simulation pipelines and experiment workflows.
- Pre- and Post-Processing Tools: Provides functions for data pre-processing, post-processing, and visualization of simulation results.
Scientific Applications:
- Cardiac electrophysiology research: Enables modeling and simulation of cardiac electrophysiology and heart function across biological scales.
- Atrial fibrillation studies: Facilitates multi-scale simulation of atrial fibrillation to investigate mechanisms and potential treatments.
Methodology:
Uses a structured modeling workflow for setting up and executing simulations, exemplified by multi-scale studies of atrial fibrillation.
Topics
Details
- License:
- Other
- Maturity:
- Mature
- Cost:
- Free of charge (with restrictions)
- Tool Type:
- command-line tool, workflow
- Operating Systems:
- Mac, Linux
- Programming Languages:
- C++, Python
- Added:
- 4/8/2021
- Last Updated:
- 4/8/2021
Operations
Publications
Plank G, Loewe A, Neic A, Augustin C, Huang Y, Gsell MAF, Karabelas E, Nothstein M, Prassl AJ, Sánchez J, Seemann G, Vigmond EJ. The<i>openCARP</i>Simulation Environment for Cardiac Electrophysiology. Unknown Journal. 2021. doi:10.1101/2021.03.01.433036.
Documentation
Downloads
- Downloads pagehttps://opencarp.org/downloadSource code, binaries for macOS and Linux, docker containers