OpenMZxy
OpenMZxy controls mass spectrometry imaging (MSI) experiments by integrating a low-temperature plasma (LTP) ambient ionization probe coupled to a quadrupole mass analyzer and USB plug-and-play components to acquire spatially resolved distributions of metabolites, proteins, and lipids in biological tissues.
Key Features:
- Cost-Effective Setup: Paired with a basic MSI system assembled from affordable, USB plug-and-play components for low-cost hardware integration.
- Versatile Ionization Source: Employs a low-temperature plasma (LTP) ambient ionization probe coupled to a quadrupole mass analyzer, enabling ionization of volatile and semi-volatile metabolites.
- Resolution and Sampling Area: Supports a practical spatial resolution of 1 mm across a 100×100 mm sampling area, enabling up to 10,000 sampling points per image.
- Sampling Modes: Supports both automatic and manual sampling modes and records position data for each sampling point.
- Analyzer Compatibility: Prototype system is adaptable for use with various types of mass analyzers, extending applicability across different instrument platforms.
Scientific Applications:
- Spatial metabolomics, lipidomics, and proteomics: Enables mapping of metabolites, proteins, and lipids within biological tissues for spatially resolved molecular analysis.
- Imaging of volatile and semi-volatile metabolites: Facilitates spatial mapping of volatile and semi-volatile small molecules using ambient LTP ionization.
- Natural product localization and discovery: Supports localization studies exemplified by imaging metabolites in Capsicum annuum ('Jalapeño pepper'), confirming capsaicin in the placenta and identifying previously unknown low molecular weight compounds in defined areas.
Methodology:
Acquisition uses an ambient low-temperature plasma (LTP) ionization probe coupled to a quadrupole mass analyzer with position-recorded sampling across a defined grid.
Topics
Collections
Details
- Tool Type:
- desktop application
- Operating Systems:
- Linux
- Programming Languages:
- Python
- Added:
- 1/17/2017
- Last Updated:
- 3/26/2019
Operations
Data Inputs & Outputs
Mass spectrum visualisation
Publications
Maldonado-Torres M, et al. 'Plug and Play' assembly of a low-temperature plasma ionization mass spectrometry imaging (LTP-MSI) system. J Proteomics. 2014; 102:60-5. doi: 10.1016/j.jprot.2014.03.003
PMID: 24642210
Documentation
Downloads
Links
Software catalogue
http://ms-utils.org