OpenSPIM

OpenSPIM enables construction and operation of Selective Plane Illumination Microscopy (SPIM) systems for light-sheet imaging of live specimens to support developmental, cellular, and neural studies with reduced phototoxicity.


Key Features:

  • Integrated hardware and software platforms: Shared designs for hardware and control software to build compact SPIM systems.
  • Customization: Configurable system components to adapt to specific experimental needs.
  • Minimal phototoxicity: Light-sheet illumination reduces photodamage, enabling prolonged live imaging including entire embryos.

Scientific Applications:

  • Developmental Biology: Live imaging of entire embryos to observe morphogenesis and developmental processes.
  • Cellular Imaging: High-resolution imaging of cells and tissues with reduced photodamage for dynamic studies.
  • Neuroscience: Imaging of neural structures and dynamics in living organisms.

Methodology:

No computational methods or analysis steps are specified in the provided description.

Topics

Details

Tool Type:
desktop application
Operating Systems:
Linux, Windows, Mac
Programming Languages:
C++
Added:
8/3/2017
Last Updated:
11/25/2024

Operations

Publications

Pitrone PG, Schindelin J, Stuyvenberg L, Preibisch S, Weber M, Eliceiri KW, Huisken J, Tomancak P. OpenSPIM: an open-access light-sheet microscopy platform. Nature Methods. 2013;10(7):598-599. doi:10.1038/nmeth.2507. PMID:23749304. PMCID:PMC7450513.

Documentation

Links