ORIENTATE
ORIENTATE applies automated machine learning classification and systematic feature selection to develop and evaluate predictive models for clinical and preventive healthcare.
Key Features:
- Automated Model Generation: Generates multiple classification models from chosen features and target variables and evaluates them for comparison.
- Cross-Validation and Model Selection: Employs cross-validation techniques to assess model performance and identify optimal models.
- Custom Feature Selection Algorithm: Implements a custom algorithm that systematically searches combinations of predictors to identify high-performing feature sets.
- Performance Metrics: Optimizes and reports performance using metrics such as F1 score and ROC AUC.
- Comprehensive Reporting and Global Interpretation: Produces detailed reports with graphs and global interpretation methods for model explanation.
- Feature Relevance and Interaction Plots: Provides plots of feature relevance and interactions to support statistical inference and interpretability.
Scientific Applications:
- Clinical predictive modeling: Develops classification models to predict clinical outcomes, exemplified by predicting need for a second sedation in pediatric dental patients.
- Pediatric dental research: Applied to a dataset of healthy children and children with special health care needs (SHCN) who underwent deep sedation to identify predictive factors.
- Preventive healthcare and early prediction: Supports early prediction tasks in preventive care through data-driven risk stratification.
- Feature discovery and hypothesis generation: Identifies predictive factors—for example, number of teeth with pulpar treatments—as candidates for further clinical investigation.
Methodology:
Integrates automated feature selection with cross-validation-based model validation; a custom algorithm systematically explores predictor combinations and optimizes performance metrics (F1 score, ROC AUC); results are interpreted using global interpretation methods and feature interaction plots.
Topics
Details
- License:
- MIT
- Cost:
- Free of charge
- Tool Type:
- web application
- Operating Systems:
- Mac, Linux, Windows
- Programming Languages:
- Python
- Added:
- 1/29/2024
- Last Updated:
- 11/24/2024
Operations
Publications
Gomez-Rios I, Egea-Lopez E, Ortiz Ruiz AJ. ORIENTATE: automated machine learning classifiers for oral health prediction and research. BMC Oral Health. 2023;23(1). doi:10.1186/s12903-023-03112-w. PMID:37340367. PMCID:PMC10283267.