Orphanet Rare
Orphanet Rare provides a standardized ontology for ocular phenotypes and rare eye diseases to enable consistent phenotypic annotation and data interoperability for research and clinical care.
Key Features:
- Ontological Framework: Built on the Human Phenotype Ontology (HPO) and the Orphanet Rare Disease Ontology (ORDO) to supply a structured vocabulary for signs, symptoms, investigation findings, and rare disease nomenclature.
- Standardized Terminology: Contains 1,106 HPO terms related to ocular phenotypes and 1,202 ORDO terms pertaining to rare eye disease nomenclature to support consistent annotation and interoperability.
- Community-Driven Development: Developed through collaboration among clinicians, patient representatives, and ontology developers from 17 countries to capture clinically relevant terms.
- Regular Updates and Community Feedback: Maintained as an ongoing project with periodic updates to incorporate new insights and community contributions.
Scientific Applications:
- Enhanced Data Interoperability: Provides standardized terminology to facilitate data sharing and integration across health information systems and research databases.
- Improved Clinical Care: Aids clinicians in accurately coding and documenting ocular phenotypes and rare eye conditions to support diagnostic precision and patient management.
- Research Advancement: Standardizes language for rare eye diseases to support evidence-based research and the development of precision ophthalmology paradigms.
Methodology:
Automated matching to existing resources was used to map and align terms across ontologies.
Topics
Collections
Details
- Tool Type:
- web application
- Added:
- 1/20/2021
- Last Updated:
- 5/18/2021
Operations
Publications
Sergouniotis PI, Maxime E, Leroux D, Olry A, Thompson R, Rath A, Robinson PN, Dollfus H. An ontological foundation for ocular phenotypes and rare eye diseases. Orphanet Journal of Rare Diseases. 2019;14(1). doi:10.1186/s13023-018-0980-6. PMID:30626441. PMCID:PMC6327432.
PMID: 30626441
PMCID: PMC6327432
Funding: - Health Program of the European Union: Framework Partnership Agreement #739534 - 'ERN-EYE'
- National Institutes of Health: NIH OD #5R24OD011883
- French Directorate General for Health and European Commission Directorate-General for Health and Consumers: #20102206 and #20133305-INSERM_FY2014
- European Commission: #305444
- National Institute for Health Research: Clinical Lecturer Programme [PIS]