One Touch Pipeline (OTP)
Automation platform for managing next generation sequencing (NGS) data. The application provides support in all steps of this process including data transfer from temporary to final storage, execution of data quality monitoring programs and alignment of reads to the reference genome using BWA based pipeline.
Topics
Collections
Details
- Maturity:
- Mature
- Tool Type:
- api, web application
- Operating Systems:
- Linux, Windows, Mac
- Programming Languages:
- Shell, Groovy
- Added:
- 5/12/2016
- Last Updated:
- 12/10/2018
Operations
Data Inputs & Outputs
Documentation
General
https://otp.dkfz.de/otp/