PDL1Binder

PDL1Binder predicts and prioritizes PD-L1-binding peptides by analyzing Next-Generation Phage Display (NGPD) deep-sequencing data with machine learning.


Key Features:

  • Integration of Next-Generation Phage Display (NGPD): Leverages NGPD biopanning and deep sequencing to isolate candidate PD-L1 binding peptides.
  • Machine Learning-Based Predictive Models: Uses diverse peptide descriptors and feature selection methods to train predictive models on NGPD deep-sequencing data to identify high-affinity PD-L1 binders.
  • Ensemble Computational Model: Employs an ensemble of multiple machine learning algorithms to improve prediction accuracy and reliability for selecting peptide candidates as alternatives or complements to monoclonal antibody therapies.

Scientific Applications:

  • Cancer immunotherapy discovery: Enables discovery of peptide inhibitors targeting the PD-1/PD-L1 pathway.
  • Therapeutic candidate prioritization: Prioritizes PD-L1-binding peptide candidates for development as alternatives or complements to monoclonal antibody therapies.
  • Immune response enhancement research: Supports identification of peptides that may enhance anti-tumor immune responses.

Methodology:

Computational analysis applies machine learning-based predictive models using diverse peptide descriptors and feature selection, and integrates predictions via an ensemble of machine learning algorithms on deep-sequencing data from NGPD experiments.

Topics

Details

Cost:
Free of charge
Tool Type:
web application
Operating Systems:
Mac, Linux, Windows
Added:
11/5/2022
Last Updated:
11/24/2024

Operations

Publications

He B, Li B, Chen X, Zhang Q, Lu C, Yang S, Long J, Ning L, Chen H, Huang J. PDL1Binder: Identifying programmed cell death ligand 1 binding peptides by incorporating next-generation phage display data and different peptide descriptors. Frontiers in Microbiology. 2022;13. doi:10.3389/fmicb.2022.928774. PMID:35910615. PMCID:PMC9335124.

PMID: 35910615
PMCID: PMC9335124
Funding: - National Natural Science Foundation of China: 61571095, 61901129, 61901130, 62071099 - Guizhou Science and Technology Department: ZK[2022]-general-038, ZK[2022]-general-056 - Guizhou University: (2018) 54, (2018) 55, [2020] 5