PDL1Binder
PDL1Binder predicts and prioritizes PD-L1-binding peptides by analyzing Next-Generation Phage Display (NGPD) deep-sequencing data with machine learning.
Key Features:
- Integration of Next-Generation Phage Display (NGPD): Leverages NGPD biopanning and deep sequencing to isolate candidate PD-L1 binding peptides.
- Machine Learning-Based Predictive Models: Uses diverse peptide descriptors and feature selection methods to train predictive models on NGPD deep-sequencing data to identify high-affinity PD-L1 binders.
- Ensemble Computational Model: Employs an ensemble of multiple machine learning algorithms to improve prediction accuracy and reliability for selecting peptide candidates as alternatives or complements to monoclonal antibody therapies.
Scientific Applications:
- Cancer immunotherapy discovery: Enables discovery of peptide inhibitors targeting the PD-1/PD-L1 pathway.
- Therapeutic candidate prioritization: Prioritizes PD-L1-binding peptide candidates for development as alternatives or complements to monoclonal antibody therapies.
- Immune response enhancement research: Supports identification of peptides that may enhance anti-tumor immune responses.
Methodology:
Computational analysis applies machine learning-based predictive models using diverse peptide descriptors and feature selection, and integrates predictions via an ensemble of machine learning algorithms on deep-sequencing data from NGPD experiments.
Topics
Details
- Cost:
- Free of charge
- Tool Type:
- web application
- Operating Systems:
- Mac, Linux, Windows
- Added:
- 11/5/2022
- Last Updated:
- 11/24/2024
Operations
Publications
He B, Li B, Chen X, Zhang Q, Lu C, Yang S, Long J, Ning L, Chen H, Huang J. PDL1Binder: Identifying programmed cell death ligand 1 binding peptides by incorporating next-generation phage display data and different peptide descriptors. Frontiers in Microbiology. 2022;13. doi:10.3389/fmicb.2022.928774. PMID:35910615. PMCID:PMC9335124.