PhyloJS

PhyloJS parses, writes, and manipulates phylogenetic trees as a zero-dependency JavaScript and TypeScript library for integration with phylogenetics and data visualization libraries.

Key Features:

• Tree Parsing and Writing: Reads and writes phylogenetic trees in standard formats for interoperability with other libraries.
• Tree Manipulation: Modifies phylogenetic trees and extracts data for downstream analysis and visualization.
• Scalability: Handles large phylogenetic trees with up to at least 10^6 tips.
• Library Integration: Operates on trees prior to visualization and integrates with phylogenetics and data visualization libraries.

Scientific Applications:

• Web-based Phylogenetics: Develops web-based phylogenetic applications that process large datasets.
• Phylogenetic Data Processing: Prepares and transforms phylogenetic trees for visualization and analysis pipelines.

Methodology:

PhyloJS implements tree reading, writing, and manipulation functions in TypeScript and JavaScript with zero dependencies.