Phylowood
Phylowood visualizes spatial-temporal phylogeographic and biogeographic histories through animated representations of annotated phylogenetic data.
Key Features:
- Spatial-temporal Animations: Generates dynamic animations that depict historical distributions of species or lineages over time and space using annotated phylogenetic input.
- Adjustable Resolution: Supports adjustable spatial and temporal resolution for animations to examine specific periods or regions within evolutionary histories.
- Lineage Highlighting: Enables highlighting of specific phylogenetic lineages to focus analysis on particular branches.
Scientific Applications:
- Biogeography and Phylogeography Visualization: Visualizes changes in species distributions over time to support studies in biogeography and phylogeography.
- Hypothesis Generation and Testing: Facilitates generation and testing of hypotheses about historical biogeographic events driven by ecological and geological factors.
Methodology:
Integrates annotated phylogenetic data with geographic information systems (GIS) principles to create spatial-temporal animations and relies on JavaScript to render visualizations within a web browser.
Topics
Details
- Tool Type:
- api
- Operating Systems:
- Linux, Windows, Mac
- Programming Languages:
- JavaScript, Ruby
- Added:
- 5/10/2018
- Last Updated:
- 12/10/2018
Operations
Publications
Landis MJ, Bedford T. Phylowood: interactive web-based animations of biogeographic and phylogeographic histories. Bioinformatics. 2013;30(1):123-124. doi:10.1093/bioinformatics/btt635. PMID:24191071. PMCID:PMC3866560.