PIA
PIA prioritizes drug targets for adult-onset and childhood-onset asthma by integrating genome-wide association studies (GWAS) and network-driven analyses to identify shared and subtype-specific therapeutic targets.
Key Features:
- Genetics-Led Approach: Uses genome-wide association studies (GWAS) data to characterize the genetic architectures specific to adult-onset and childhood-onset asthma.
- Network-Driven Prioritization: Integrates network analysis to identify genes and pathways involved in asthma pathogenesis across age-defined subtypes.
- Shared and Distinct Target Identification: Distinguishes drug targets that are shared by both subtypes from those that are specific to adult-onset or childhood-onset asthma.
- Pathway Crosstalk Analysis: Identifies crosstalk genes in signaling pathways, noting shared crosstalk gene enrichment in JAK-STAT and childhood-onset-specific enrichment in PI3K-AKT-mTOR.
- Clinical Relevance and Drug Repurposing: Highlights genes already targeted by existing licensed medications to nominate potential drug repurposing candidates, with emphasis on childhood-onset asthma.
Scientific Applications:
- Therapeutic target discovery: Identifies and prioritizes candidate drug targets aligned with genetic and molecular features of adult- and childhood-onset asthma.
- Drug repurposing prioritization: Guides selection of existing licensed medications for repurposing based on shared or subtype-specific targets.
- Subtype-specific mechanism elucidation: Informs comparative analysis of pathway involvement (for example, JAK-STAT versus PI3K-AKT-mTOR) between asthma subtypes.
Methodology:
Uses GWAS data to define subtype-specific genetic architectures; integrates network analysis to prioritize genes and pathways; performs pathway crosstalk analysis to identify crosstalk genes; maps genes to existing licensed drug targets to highlight repurposing candidates.
Topics
Details
- Cost:
- Free of charge
- Tool Type:
- library
- Operating Systems:
- Mac, Linux, Windows
- Programming Languages:
- R
- Added:
- 2/23/2024
- Last Updated:
- 11/24/2024
Operations
Publications
Bao C, Gu L, Wang S, Zou K, Zhang Z, Jiang L, Chen L, Fang H. Priority index for asthma (PIA): In silico discovery of shared and distinct drug targets for adult- and childhood-onset disease. Computers in Biology and Medicine. 2023;162:107095. doi:10.1016/j.compbiomed.2023.107095. PMID:37285660.