PlateEditor
PlateEditor manages multi-well plate layouts and analyzes plate-derived experimental data to support experimental design, dose–response and combination experiments, and visualization for biological assays.
Key Features:
- Flexibility in Layout Design: Creates complex plate layouts including dose–response curves and multiple combination experiments across plate formats supporting up to 1536 wells.
- Client-Side Operation: Implements all computation on the client side using pure JavaScript with no data transferred to a server.
- Heatmap Visualization and Data Aggregation: Generates heatmap visualizations of plate data and aggregates and formats data for export to downstream analysis.
Scientific Applications:
- High-throughput screening: Supports design and analysis of high-throughput screening assays using multi-well plates.
- Pharmacological dose–response analysis: Enables design and analysis of dose–response curves for pharmacological and drug-response studies.
- Combination experiments: Accommodates layout and analysis of multiple combination experiments across plate formats.
- Data aggregation for downstream analysis: Aggregates and formats plate-derived data for export and downstream computational analysis.
Methodology:
Client-side implementation in pure JavaScript; generation of plate layouts up to 1536 wells; heatmap visualization and data aggregation with data formatted for export.
Topics
Details
- License:
- MIT
- Cost:
- Free of charge
- Tool Type:
- web application
- Operating Systems:
- Mac, Linux, Windows
- Programming Languages:
- JavaScript
- Added:
- 11/22/2021
- Last Updated:
- 11/22/2021
Operations
Publications
Delorme V, Woo M, Falcão VCdA, Wood C. PlateEditor: A web-based application for the management of multi-well plate layouts and associated data. PLOS ONE. 2021;16(5):e0252488. doi:10.1371/journal.pone.0252488. PMID:34048502. PMCID:PMC8162687.
PMID: 34048502
PMCID: PMC8162687
Funding: - National Research Foundation of Korea: 2017M3A9G6068246, 2019R1A2C2084652