Poky

Poky provides automated computational tools for NMR data analysis, enabling signal detection, resonance assignment, structure calculation, and relaxation/dynamics studies of biomolecules.


Key Features:

  • Automation: Implements automated procedures for signal detection, resonance assignment, structure calculation, and relaxation analysis from NMR data.
  • Extensibility and Scalability: Supports scripting and batching, automated analysis templates, and user-defined library sets to customize and scale NMR workflows.
  • Comprehensive Modules: Includes diverse modules covering signal processing, assignment, structure calculation, and relaxation/dynamics analyses for NMR studies.

Scientific Applications:

  • Resonance Assignments: Facilitates accurate mapping of atomic nuclei in complex molecules.
  • Structure Calculation: Enables detailed three-dimensional structural analysis of biomolecules to inform function and interaction studies.
  • Dynamics Studies: Supports investigation of molecular dynamics and conformational changes over time.

Methodology:

Integrates automation tools for NMR data processing and analysis to reduce manual effort in signal detection, assignment, structure calculation, and relaxation/dynamics workflows.

Topics

Details

Tool Type:
workflow
Added:
11/22/2021
Last Updated:
11/24/2024

Operations

Publications

Lee W, Rahimi M, Lee Y, Chiu A. POKY: a software suite for multidimensional NMR and 3D structure calculation of biomolecules. Bioinformatics. 2021;37(18):3041-3042. doi:10.1093/bioinformatics/btab180. PMID:33715003. PMCID:PMC8479676.

PMID: 33715003
PMCID: PMC8479676
Funding: - National Science Foundation: DBI-1902076, DBI-2051595