prcbench

prcbench evaluates classifier performance on imbalanced datasets using precision-recall curves to provide more informative assessment than ROC plots.


Key Features:

  • Precision-Recall Plot Calculation: Fast and accurate computation of precision-recall curves for assessing classifier performance on imbalanced classes.
  • Efficiency Under Various Conditions: Engineered to perform efficiently and robustly across different dataset conditions.
  • Comprehensive Functionalities: Includes multiple functions for detailed performance evaluation of classifiers beyond basic curve calculation.

Scientific Applications:

  • Bioinformatics and imbalanced-data analysis: Applied to assess classifier performance in bioinformatics and other domains where class imbalance is prevalent.
  • Model selection and validation: Aids in accurate assessment of classifiers to inform model selection and validation processes.

Methodology:

Computes precision-recall curves for classifier evaluation and is implemented in R with C++ to combine R statistical routines with C++ computational efficiency.

Topics

Details

License:
GPL-3.0
Maturity:
Mature
Cost:
Free of charge
Tool Type:
command-line tool
Operating Systems:
Linux, Windows, Mac
Programming Languages:
R
Added:
10/18/2016
Last Updated:
1/17/2019

Operations

Data Inputs & Outputs

Publications

Saito T, Rehmsmeier M. Precrec: fast and accurate precision–recall and ROC curve calculations in R. Bioinformatics. 2016;33(1):145-147. doi:10.1093/bioinformatics/btw570. PMID:27591081. PMCID:PMC5408773.

Documentation

Links