prcbench
prcbench evaluates classifier performance on imbalanced datasets using precision-recall curves to provide more informative assessment than ROC plots.
Key Features:
- Precision-Recall Plot Calculation: Fast and accurate computation of precision-recall curves for assessing classifier performance on imbalanced classes.
- Efficiency Under Various Conditions: Engineered to perform efficiently and robustly across different dataset conditions.
- Comprehensive Functionalities: Includes multiple functions for detailed performance evaluation of classifiers beyond basic curve calculation.
Scientific Applications:
- Bioinformatics and imbalanced-data analysis: Applied to assess classifier performance in bioinformatics and other domains where class imbalance is prevalent.
- Model selection and validation: Aids in accurate assessment of classifiers to inform model selection and validation processes.
Methodology:
Computes precision-recall curves for classifier evaluation and is implemented in R with C++ to combine R statistical routines with C++ computational efficiency.
Topics
Details
- License:
- GPL-3.0
- Maturity:
- Mature
- Cost:
- Free of charge
- Tool Type:
- command-line tool
- Operating Systems:
- Linux, Windows, Mac
- Programming Languages:
- R
- Added:
- 10/18/2016
- Last Updated:
- 1/17/2019
Operations
Data Inputs & Outputs
Statistical calculation
Publications
Saito T, Rehmsmeier M. Precrec: fast and accurate precision–recall and ROC curve calculations in R. Bioinformatics. 2016;33(1):145-147. doi:10.1093/bioinformatics/btw570. PMID:27591081. PMCID:PMC5408773.
Documentation
Citation instructions
https://cran.r-project.org/web/packages/prcbench/citation.htmlLinks
Repository
https://github.com/takayasaito/prcbench