PredMS
PredMS predicts the metabolic stability of small compounds in human liver microsomes to support early-stage drug discovery and compound prioritization.
Key Features:
- Model Basis: PredMS employs a random forest algorithm, leveraging its robustness for classification tasks.
- Training Data: The model was trained on an in-house database of metabolic stability measurements from 1,917 compounds.
- Prediction Categories: PredMS classifies small compounds as either stable or unstable with respect to metabolic stability in human liver microsomes.
Scientific Applications:
- Early-stage screening: Predicting metabolic stability in human liver microsomes to inform compound selection in drug discovery.
- Candidate prioritization: Prioritizing compounds for experimental testing and progression decisions based on predicted stability.
- Reducing experimental burden: Minimizing costly and time-consuming in vitro metabolic stability evaluations by providing predictive assessments.
Methodology:
PredMS was developed by training a random forest classification model on an in-house metabolic stability dataset of 1,917 compounds.
Topics
Details
- Cost:
- Free of charge
- Tool Type:
- web application
- Operating Systems:
- Mac, Linux, Windows
- Added:
- 2/8/2022
- Last Updated:
- 2/8/2022
Operations
Data Inputs & Outputs
Publications
Ryu JY, Lee JH, Lee BH, Song JS, Ahn S, Oh K. PredMS: a random forest model for predicting metabolic stability of drug candidates in human liver microsomes. Bioinformatics. 2021;38(2):364-368. doi:10.1093/bioinformatics/btab547. PMID:34515778.
PMID: 34515778
Funding: - Korean government: 2020R1C1C1003218, NRF-2019M3E5D4065860