Prostate Anatomies and Lesion Automatic Segmentor

Whole-gland, zonal & lesion prostate segmentation from multi-parametric MRI. Cascaded nnU-Net v2 (anatomies) + ProLesA-Net (lesions). A three-stage pipeline that segments the whole gland (WG), peripheral zone (PZ), transition zone (TZ) and (when ADC + DWI are provided) the prostate lesions from prostate MRI. The anatomies are produced by two cascaded nnU-Net v2 models on T2; the lesion mask is produced by ProLesA-Net (Keras / TensorFlow 2.11) operating on T2 + ADC + DWI inside the WG mask