Prot2Prot

Prot2Prot transforms simplified molecular representations into photorealistic macromolecular images to accelerate structural biology visualization.


Key Features:

  • Deep learning model: Implements a deep learning approach to generate rendered molecular images from input representations.
  • Image-to-image translation: Uses image-to-image translation techniques to map simple, easy-to-generate molecular depictions to photorealistic outputs.
  • Input representation: Operates on simplified molecular illustrations rather than full 3D scene descriptions.
  • Photorealistic rendering comparability: Produces images that closely resemble renderings from 3D graphics software such as Maya, 3ds Max, and Blender.
  • Computational efficiency: Reduces scene setup and rendering time and computational resource requirements compared with conventional photorealistic rendering pipelines.

Scientific Applications:

  • Structural analysis: Provides photorealistic visualizations to support interpretation of macromolecular structure in structural biology.
  • Publication figures: Generates high-quality images suitable for inclusion in scientific publications and figure preparation.
  • Education: Supplies detailed molecular depictions for teaching structural and functional concepts of biomolecules.
  • Outreach: Produces accessible visual materials for communicating biomolecular structure to broader audiences.

Methodology:

Applies image-to-image translation via a deep learning model to convert simplified molecular representations into photorealistic macromolecular images.

Topics

Details

License:
Apache-2.0
Cost:
Free of charge
Tool Type:
web application
Operating Systems:
Mac, Linux, Windows
Added:
11/29/2022
Last Updated:
11/24/2024

Operations

Publications

Durrant JD. Prot2Prot: a deep learning model for rapid, photorealistic macromolecular visualization. Journal of Computer-Aided Molecular Design. 2022;36(9):677-686. doi:10.1007/s10822-022-00471-4. PMID:36008698. PMCID:PMC9512884.

PMID: 36008698
PMCID: PMC9512884
Funding: - National Institute of General Medical Sciences: R01GM132353