ProtSweep

ProtSweep annotates protein sequences by identifying homology to known sequences to infer structural and functional properties.


Key Features:

  • Homology-Based Annotation: Identifies sequence similarity to infer protein structure and function.
  • Public Database Integration: Integrates public protein databases to support annotation.
  • Comprehensive Analysis: Provides structural and functional insights derived from homology evidence.

Scientific Applications:

  • Protein annotation and functional inference: Supports annotation of protein sequences and inference of structure and function using homology-based evidence.

Methodology:

Performs homology-based sequence comparisons and integrates public protein databases for annotation of protein sequences.

Topics

Details

Tool Type:
web application
Operating Systems:
Linux, Windows, Mac
Added:
12/18/2017
Last Updated:
12/10/2018

Operations

Publications

del Val C, Ernst P, Falkenhahn M, Fladerer C, Glatting KH, Suhai S, Hotz-Wagenblatt A. ProtSweep, 2Dsweep and DomainSweep: protein analysis suite at DKFZ. Nucleic Acids Research. 2007;35(Web Server):W444-W450. doi:10.1093/nar/gkm364. PMID:17526514. PMCID:PMC1933246.

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