ProtSweep
ProtSweep annotates protein sequences by identifying homology to known sequences to infer structural and functional properties.
Key Features:
- Homology-Based Annotation: Identifies sequence similarity to infer protein structure and function.
- Public Database Integration: Integrates public protein databases to support annotation.
- Comprehensive Analysis: Provides structural and functional insights derived from homology evidence.
Scientific Applications:
- Protein annotation and functional inference: Supports annotation of protein sequences and inference of structure and function using homology-based evidence.
Methodology:
Performs homology-based sequence comparisons and integrates public protein databases for annotation of protein sequences.
Topics
Details
- Tool Type:
- web application
- Operating Systems:
- Linux, Windows, Mac
- Added:
- 12/18/2017
- Last Updated:
- 12/10/2018
Operations
Publications
del Val C, Ernst P, Falkenhahn M, Fladerer C, Glatting KH, Suhai S, Hotz-Wagenblatt A. ProtSweep, 2Dsweep and DomainSweep: protein analysis suite at DKFZ. Nucleic Acids Research. 2007;35(Web Server):W444-W450. doi:10.1093/nar/gkm364. PMID:17526514. PMCID:PMC1933246.
DOI: 10.1093/nar/gkm364