ProtTest

ProtTest selects the best-fit model of amino acid replacement from candidate models using protein sequence alignments for phylogenetic and evolutionary analyses.

Key Features:

• Evaluation Algorithm: Evaluates and compares multiple evolutionary models using protein sequence alignment data.

Scientific Applications:

• Phylogenetic Analysis: Facilitates accurate phylogenetic inference in studies of protein evolution.

Methodology:

Evaluates candidate models based on likelihood ratios and information criteria to select the most appropriate model for amino acid replacement in protein sequences.