(PS)2-v2: Protein Structure Prediction Server

(PS)2-v2: Protein Structure Prediction Server analyzes and aligns target data with selected templates using probabilistic models and hierarchical clustering.


Key Features:

  • Template Selection: Uses a consensus-based approach dynamically updated based on performance metrics.
  • Target-Template Alignment: Quantifies alignment scores using a probabilistic model and visualizes results as 3D graphs.
  • Structure Building: Builds structures using a hierarchical clustering algorithm validated by cross-validation techniques and optimized for scalability.

Scientific Applications:

  • Machine learning and statistical analysis: Analyzes complex data relationships in machine learning and statistical analysis.

Methodology:

Computational methods include probabilistic models, Bayesian inference, machine learning techniques, hierarchical clustering, and cross-validation.

Topics

Details

Tool Type:
web application
Operating Systems:
Linux, Windows, Mac
Added:
3/25/2017
Last Updated:
11/25/2024

Operations

Publications

Chen C, Hwang J, Yang J. (PS)2: protein structure prediction server. Nucleic Acids Research. 2006;34(Web Server):W152-W157. doi:10.1093/nar/gkl187. PMID:16844981. PMCID:PMC1538880.

Documentation