PSIQUIC (DIP)

PSIQUIC (DIP) aggregates protein-protein interaction data from multiple sources to produce a curated dataset and a confidence-filtered CORE set for evaluating experimental and computational interaction studies.


Key Features:

  • CORE Set Identification: Identifies a CORE set of interactions deemed most reliable based on aggregated evidence and quality criteria.
  • Integration of Diverse Data Sources: Amalgamates experimental interaction evidence from multiple studies and databases into a consistent dataset.
  • Quality Assessment: Applies rigorous quality assessment methods to distinguish high-confidence interactions and highlight robust experimental support.

Scientific Applications:

  • Evaluation of High-Throughput Data: Provides the CORE set as a reference standard for assessing the reliability of high-throughput protein-protein interaction datasets.

Methodology:

Integrates experimental evidence from multiple studies into a unified database and applies quality-assessment criteria to identify high-confidence interactions and the CORE set.

Topics

Details

Tool Type:
api
Operating Systems:
Linux, Windows, Mac
Added:
8/3/2015
Last Updated:
11/25/2024

Operations

Publications

Salwinski L. The Database of Interacting Proteins: 2004 update. Nucleic Acids Research. 2004;32(90001):449D-451. doi:10.1093/nar/gkh086. PMID:14681454. PMCID:PMC308820.

Documentation

Links