PSIQUIC (DIP)
PSIQUIC (DIP) aggregates protein-protein interaction data from multiple sources to produce a curated dataset and a confidence-filtered CORE set for evaluating experimental and computational interaction studies.
Key Features:
- CORE Set Identification: Identifies a CORE set of interactions deemed most reliable based on aggregated evidence and quality criteria.
- Integration of Diverse Data Sources: Amalgamates experimental interaction evidence from multiple studies and databases into a consistent dataset.
- Quality Assessment: Applies rigorous quality assessment methods to distinguish high-confidence interactions and highlight robust experimental support.
Scientific Applications:
- Evaluation of High-Throughput Data: Provides the CORE set as a reference standard for assessing the reliability of high-throughput protein-protein interaction datasets.
Methodology:
Integrates experimental evidence from multiple studies into a unified database and applies quality-assessment criteria to identify high-confidence interactions and the CORE set.
Topics
Details
- Tool Type:
- api
- Operating Systems:
- Linux, Windows, Mac
- Added:
- 8/3/2015
- Last Updated:
- 11/25/2024
Operations
Publications
Salwinski L. The Database of Interacting Proteins: 2004 update. Nucleic Acids Research. 2004;32(90001):449D-451. doi:10.1093/nar/gkh086. PMID:14681454. PMCID:PMC308820.
Documentation
Links
Software catalogue
https://www.biocatalogue.org/services/3622