DRAVP

DRAVP provides a curated database of antiviral peptides and proteins to support discovery, characterization, and structure-guided design of antiviral agents.


Key Features:

  • Extensive Data Repository: DRAVP consolidates general details, antiviral activity profiles, structural data, physicochemical properties, and literature references for antiviral peptides and proteins.
  • Structural Predictions with AlphaFold: DRAVP uses AlphaFold to predict structures of antiviral peptides and proteins that lack experimentally determined structures.
  • Coverage of Natural and Synthetic Antivirals: DRAVP includes naturally occurring antiviral proteins (e.g., interferons) and synthetic antimicrobial peptides (e.g., defensins), with annotations on antiviral effects and immune-modulatory capacity.

Scientific Applications:

  • Antiviral Candidate Identification: Use curated activity profiles and physicochemical properties to identify and prioritize antiviral peptide and protein candidates.
  • Structure-Guided Design: Employ AlphaFold-predicted and curated structural data to model peptide–protein interactions and guide rational design of improved compounds.
  • Mechanistic and Interdisciplinary Studies: Support analysis of mechanisms of action and studies integrating bioinformatics, structural biology, and pharmacology.

Methodology:

Consolidation of literature-derived annotations and use of AlphaFold for structure prediction of antiviral peptides and proteins.

Topics

Details

Cost:
Free of charge
Tool Type:
web application
Operating Systems:
Mac, Linux, Windows
Programming Languages:
PHP, JavaScript
Added:
10/15/2023
Last Updated:
10/15/2023

Operations

Publications

Liu Y, Zhu Y, Sun X, Ma T, Lao X, Zheng H. DRAVP: A Comprehensive Database of Antiviral Peptides and Proteins. Viruses. 2023;15(4):820. doi:10.3390/v15040820. PMID:37112801. PMCID:PMC10141206.

PMID: 37112801
Funding: - National Natural Science Foundation of China: 82073767, 82273834, PAPD2014-65 - Priority Academic Program Development of Jiangsu Higher Education Institutions: 82073767, 82273834, PAPD2014-65

Links