PubTator
PubTator automates text mining from PubMed-like biomedical literature to extract relevant information for automated curation and bioinformatics research.
Key Features:
- Automated text mining: Extracts relevant information from PubMed-like biomedical literature at scale.
- Advanced text mining algorithms: Uses advanced algorithms for information extraction from biomedical text.
- Rigorous evaluation: Algorithms have been rigorously evaluated and demonstrate high-quality results.
- Challenge performance: Demonstrates reliability through success in challenge competitions.
- Large-scale processing and accuracy: Enables efficient processing of large datasets with improved accuracy.
Scientific Applications:
- Bioinformatics Research: Supports drug discovery, genetic research, and clinical studies by automating curation processes.
Methodology:
Employs advanced text mining algorithms to extract relevant information from biomedical literature; these algorithms have been rigorously evaluated and demonstrated reliability in challenge competitions, enabling efficient processing of large datasets with improved accuracy.
Topics
Details
- Tool Type:
- web application
- Operating Systems:
- Linux, Windows, Mac
- Added:
- 3/25/2017
- Last Updated:
- 12/10/2018
Operations
Publications
Wei CH, et al. PubTator: a web-based text mining tool for assisting biocuration. Nucleic Acids Res. 2013; 41:W518-22. doi: 10.1093/nar/gkt441
PMID: 23703206