Putracer
Putracer detects protein domains by analyzing accessible surface area (ASA) and backbone hydrogen bond energy (HBE) to segment protein chains into structural domains.
Key Features:
- ASA and HBE Analysis: Segments protein chains into domains based on changes in accessible surface area (ASA) and backbone hydrogen bond energy (HBE).
Scientific Applications:
- Structural Bioinformatics: Dissects protein structures to characterize domain boundaries and inform structure–function analysis.
Methodology:
Computes accessible surface area (ASA) and backbone hydrogen bond energy (HBE) and segments protein chains into domains based on changes in these measures.
Topics
Details
- Tool Type:
- web application
- Operating Systems:
- Linux, Windows, Mac
- Added:
- 8/3/2017
- Last Updated:
- 11/25/2024
Operations
Publications
ARAB SS, GHARAMALEKI MP, PASHANDI Z, MOBASSERI R. PUTRACER: A NOVEL METHOD FOR IDENTIFICATION OF CONTINUOUS-DOMAINS IN MULTI-DOMAIN PROTEINS. Journal of Bioinformatics and Computational Biology. 2013;11(01):1340012. doi:10.1142/s021972001340012x. PMID:23427994.
PMID: 23427994
Documentation
Links
Software catalogue
http://www.mybiosoftware.com/putracer-protein-unit-tracer.html