Putracer

Putracer detects protein domains by analyzing accessible surface area (ASA) and backbone hydrogen bond energy (HBE) to segment protein chains into structural domains.


Key Features:

  • ASA and HBE Analysis: Segments protein chains into domains based on changes in accessible surface area (ASA) and backbone hydrogen bond energy (HBE).

Scientific Applications:

  • Structural Bioinformatics: Dissects protein structures to characterize domain boundaries and inform structure–function analysis.

Methodology:

Computes accessible surface area (ASA) and backbone hydrogen bond energy (HBE) and segments protein chains into domains based on changes in these measures.

Topics

Details

Tool Type:
web application
Operating Systems:
Linux, Windows, Mac
Added:
8/3/2017
Last Updated:
11/25/2024

Operations

Publications

ARAB SS, GHARAMALEKI MP, PASHANDI Z, MOBASSERI R. PUTRACER: A NOVEL METHOD FOR IDENTIFICATION OF CONTINUOUS-DOMAINS IN MULTI-DOMAIN PROTEINS. Journal of Bioinformatics and Computational Biology. 2013;11(01):1340012. doi:10.1142/s021972001340012x. PMID:23427994.

Documentation

Links