pyActigraphy
pyActigraphy provides visualization and analysis of actigraphy data to quantify rest-activity rhythms and detect sleep for circadian rhythm and sleep research.
Key Features:
- Data Visualization: Visualizes rest-activity patterns and sleep-wake cycles from actigraphy recordings.
- Multiple Sleep Detection Algorithms: Includes a variety of automated algorithms to detect sleep periods from actigraphy data.
- Rest-Activity Rhythm Variables Quantification: Computes quantitative rest-activity rhythm metrics for circadian analysis.
- Support for Multiple Data Formats: Reads and processes multiple actigraphy data formats to support data from different devices.
- Advanced Signal Processing Analyses: Performs advanced signal-processing analyses on actigraphy time series.
- Sleep Agenda Visualization: Generates visualizations of sleep agendas and longitudinal sleep-wake schedules.
Scientific Applications:
- Circadian Rhythm Analysis: Quantification and analysis of circadian rest-activity patterns.
- Sleep Research: Automated detection and characterization of sleep timing, duration, and fragmentation.
- Population-based and Epidemiological Studies: Analysis of large datasets to study population-level rest-activity patterns.
- Clinical Assessments: Support for longitudinal assessment of sleep-wake behavior in clinical research contexts.
Methodology:
Implements multiple automated sleep-detection algorithms and advanced signal-processing techniques on actigraphy recordings; specific algorithm names and computational steps are not specified in the input.
Topics
Details
- Programming Languages:
- Python
- Added:
- 1/18/2021
- Last Updated:
- 1/30/2021
Operations
Publications
Hammad G, Reyt M, Beliy N, Baillet M, Deantoni M, Lesoinne A, Muto V, Schmidt C. pyActigraphy: open-source python package for actigraphy data visualisation and analysis. Unknown Journal. 2020. doi:10.1101/2020.12.03.400226.