PyFDAP
PyFDAP analyzes Fluorescence Decay After Photoconversion (FDAP) datasets by fitting linear and non-linear decay functions to model fluorescence decay processes.
Key Features:
- Decay function fitting: Fits linear and non-linear decay functions to FDAP datasets to model fluorescence decay.
- Multiple fitting algorithms: Supports multiple fitting algorithms to select appropriate models for FDAP data.
- Data structuring and large-dataset handling: Provides robust data structuring and efficient processing of large FDAP datasets.
- Plotting and visualization: Includes plotting options to visualize raw FDAP data and fitted decay models.
- Implementation: Implemented in Python.
Scientific Applications:
- Fluorescence decay modeling: Quantifies decay kinetics from FDAP experiments by fitting decay models to photoconversion data.
- Photoconversion and fluorescence-based studies: Supports interpretation of photoconversion dynamics and other fluorescence-based biological phenomena through fitted decay models.
Methodology:
Computational methods include fitting linear and non-linear decay functions using multiple fitting algorithms, robust data structuring and processing for large FDAP datasets, and plotting of raw data and fitted models; the software is implemented in Python.
Topics
Details
- Tool Type:
- desktop application
- Operating Systems:
- Linux, Windows, Mac
- Programming Languages:
- Python
- Added:
- 8/3/2017
- Last Updated:
- 11/25/2024
Operations
Publications
Bläßle A, Müller P. PyFDAP: automated analysis of fluorescence decay after photoconversion (FDAP) experiments. Bioinformatics. 2014;31(6):972-974. doi:10.1093/bioinformatics/btu735. PMID:25380959.
PMID: 25380959