RangeShifter

RangeShifter simulates spatial eco-evolutionary dynamics to model individual-based population, dispersal (including evolving emigration, transfer, and settlement rules), and genetic (neutral and adaptive) responses to temporally changing landscapes and management scenarios.


Key Features:

  • Process-Based Modelling: Utilizes process-based models to predict species responses to environmental change and management interventions.
  • Dynamic Landscapes Simulation: Simulates ecological dynamics on temporally changing landscapes to represent range expansions and contractions.
  • Explicit Genetic Modelling: Implements an explicit genetic architecture enabling simulation of neutral and adaptive genetic processes.
  • Evolutionary Dispersal Dynamics: Supports evolving emigration, transfer, and settlement rules to model dispersal evolution under changing conditions.
  • Individual-Based Models: Represents populations as intricate individual-based models capturing demographic and behavioural variation.
  • Implementation: Implemented in object-oriented C++ and redeveloped for cross-platform operation including high-performance computing clusters.

Scientific Applications:

  • Reintroduction Strategies: Simulates outcomes of alternative reintroduction scenarios to inform strategy evaluation.
  • Range Expansion Patterns: Investigates species range expansion across dynamically changing landscapes.
  • Population Viability Assessments: Assesses population viability across complex landscapes incorporating ecological and evolutionary processes.

Methodology:

Implemented in object-oriented C++ to perform computationally efficient individual-based simulations and redeveloped for cross-platform execution including high-performance computing clusters.

Topics

Details

Programming Languages:
C++, R
Added:
1/18/2021
Last Updated:
2/3/2021

Operations

Publications

Bocedi G, Palmer SCF, Malchow A, Zurell D, Watts K, Travis JMJ. RangeShifter 2.0: An extended and enhanced platform for modelling spatial eco-evolutionary dynamics and species’ responses to environmental changes. Unknown Journal. 2020. doi:10.1101/2020.11.26.400119.

Documentation

Links