RangeShifter
RangeShifter simulates spatial eco-evolutionary dynamics to model individual-based population, dispersal (including evolving emigration, transfer, and settlement rules), and genetic (neutral and adaptive) responses to temporally changing landscapes and management scenarios.
Key Features:
- Process-Based Modelling: Utilizes process-based models to predict species responses to environmental change and management interventions.
- Dynamic Landscapes Simulation: Simulates ecological dynamics on temporally changing landscapes to represent range expansions and contractions.
- Explicit Genetic Modelling: Implements an explicit genetic architecture enabling simulation of neutral and adaptive genetic processes.
- Evolutionary Dispersal Dynamics: Supports evolving emigration, transfer, and settlement rules to model dispersal evolution under changing conditions.
- Individual-Based Models: Represents populations as intricate individual-based models capturing demographic and behavioural variation.
- Implementation: Implemented in object-oriented C++ and redeveloped for cross-platform operation including high-performance computing clusters.
Scientific Applications:
- Reintroduction Strategies: Simulates outcomes of alternative reintroduction scenarios to inform strategy evaluation.
- Range Expansion Patterns: Investigates species range expansion across dynamically changing landscapes.
- Population Viability Assessments: Assesses population viability across complex landscapes incorporating ecological and evolutionary processes.
Methodology:
Implemented in object-oriented C++ to perform computationally efficient individual-based simulations and redeveloped for cross-platform execution including high-performance computing clusters.
Topics
Details
- Programming Languages:
- C++, R
- Added:
- 1/18/2021
- Last Updated:
- 2/3/2021
Operations
Publications
Bocedi G, Palmer SCF, Malchow A, Zurell D, Watts K, Travis JMJ. RangeShifter 2.0: An extended and enhanced platform for modelling spatial eco-evolutionary dynamics and species’ responses to environmental changes. Unknown Journal. 2020. doi:10.1101/2020.11.26.400119.