RASCO
RASCO mitigates spatial confounding in cancer disease mapping to improve inference on covariate effects and spatial patterns of areal count data.
Key Features:
- Spatial Confounding Mitigation: Implements the RHZ, HH, and SPOCK approaches to alleviate correlation between spatial random effects and fixed covariates.
- Restricted Spatial Regressions: Constructs restricted spatial regressions by projecting latent spatial effects onto the orthogonal space of covariates or by displacing spatial locations.
- Model Flexibility: Supports parametric areal count models including Poisson, generalized Poisson, and negative binomial and quantifies spatial association using the conditional autoregressive (CAR) model.
- Bayesian Inference with INLA: Performs Bayesian inference and can be accelerated using the integrated nested Laplace approximation (INLA).
- Implementation: Implemented in R for fitting spatial and restricted spatial regression models for areal count responses.
Scientific Applications:
- Cancer disease mapping: Enables more accurate estimation of geographical patterns in cancer incidence, prevalence, status, and progression by addressing spatial confounding.
- Inference on covariate effects: Provides unbiased assessment of fixed covariate effects in areal count models when latent spatial association is present.
Methodology:
Implements RHZ, HH, and SPOCK approaches; constructs restricted spatial regressions via projection onto covariate-orthogonal space or spatial location displacement; fits Poisson, generalized Poisson, and negative binomial areal count models with CAR spatial association; performs Bayesian inference, often using INLA.
Topics
Details
- Programming Languages:
- R
- Added:
- 1/18/2021
- Last Updated:
- 11/24/2024
Operations
Publications
Azevedo DRM, Bandyopadhyay D, Prates MO, Abdel‐Salam AG, Garcia D. Assessing spatial confounding in cancer disease mapping using R. Cancer Reports. 2020;3(4). doi:10.1002/cnr2.1263. PMID:32721138. PMCID:PMC7941433.